pharmaceuticals Article Cryptolepine Suppresses Colorectal Cancer Cell Proliferation, Stemness, and Metastatic Processes by Inhibiting WNT/β-Catenin Signaling Jude Tetteh Quarshie , Kwadwo Fosu , Nicholas Awuku Offei , Augustine Kojo Sobo, Osbourne Quaye and Anastasia Rosebud Aikins * West African Centre for Cell Biology of Infectious Pathogens (WACCBIP), Department of Biochemistry Cell and Molecular Biology, University of Ghana, Accra P.O. Box LG 54, Ghana * Correspondence: araikins@ug.edu.gh Abstract: Colorectal cancer (CRC) is the third most frequent cancer and the second leading cause of cancer-related deaths globally. Evidence shows that over 90% of CRC cases are initiated by a deregulated Wingless Integrated Type-1 (WNT)/β-catenin signaling pathway. The WNT/β-catenin pathway also promotes CRC cell proliferation, stemness, and metastasis. Therefore, modulators of the WNT/β-catenin pathway may serve as promising regimens for CRC. This study investigated the effect of cryptolepine—a plant-derived compound—on the WNT/β-catenin pathway in CRC. Two CRC cell lines, COLO205 and DLD1, were treated with cryptolepine or XAV 939 (a WNT inhibitor) in the presence or absence of WNT3a (a WNT activator). Using a tetrazolium-based assay, cryptolepine was found to reduce cell viability in a dose- and time-dependent manner and was a more potent inhibitor of viability than XAV 939. RT-qPCR analyses showed that cryptolepine reverses WNT3a- induced expression of β-catenin, c-MYC, and WISP1, suggesting that cryptolepine inhibits WNT3a- mediated activation of WNT/β-catenin signaling. Cryptolepine also repressed WNT3a-induced OCT4 and CD133 expression and suppressed colony formation of the cells, indicating that cryptolepine inhibits the stemness of CRC cells. Additionally, cryptolepine inhibited WNT3a-induced epithelial-to- mesenchymal transition by reducing the expression of SNAI1 and TWIST1 genes. In a wound healing Citation: Quarshie, J.T.; Fosu, K.; assay, cryptolepine was found to suppress cell migration under unstimulated and WNT3a-stimulated Offei, N.A.; Sobo, A.K.; Quaye, O.; conditions. Moreover, cryptolepine downregulated WNT3a-induced expression of MMP2 and MMP9 Aikins, A.R. Cryptolepine Suppresses genes, which are involved in cancer cell invasion. Altogether, cryptolepine suppresses CRC cell Colorectal Cancer Cell Proliferation, Stemness, and Metastatic Processes proliferation, stemness, and metastatic properties by inhibiting WNT3a-mediated activation of the by Inhibiting WNT/β-Catenin WNT/β-catenin signaling pathway. These findings provide a rationale for considering cryptolepine Signaling. Pharmaceuticals 2023, 16, as a potential WNT inhibitor in CRC. 1026. https://doi.org/10.3390/ ph16071026 Keywords: cryptolepine; WNT/β-catenin signaling; colorectal cancer; proliferation; stemness; metastasis Academic Editor: Giorgio Cozza Received: 31 May 2023 Revised: 25 June 2023 1. Introduction Accepted: 4 July 2023 In the year 2020, colorectal cancer (CRC) accounted for 1.9 million new cancer cases Published: 19 July 2023 and 935,000 cancer-related deaths [1]. It causes severe morbidity in affected persons, and the probability of survival depends on the stage at diagnosis [2]. Research is ongoing to find the etiology of CRC, and although this remains elusive, evidence shows that CRC Copyright: © 2023 by the authors. is initiated when genetic and epigenetic alterations in oncogenes and tumor suppressor Licensee MDPI, Basel, Switzerland. genes accumulate in mucosal epithelial cells of the intestines [3]. Predisposing factors This article is an open access article include gender (males are more susceptible than females), obesity, a sedentary lifestyle, distributed under the terms and consumption of high amounts of alcohol and red meat, and smoking cigarettes. Protective conditions of the Creative Commons factors include the consumption of whole grains, dairy products, and fibers [4]. Attribution (CC BY) license (https:// In the healthy human gut, the entire lining of the colonic lumen self-renews weekly to creativecommons.org/licenses/by/ replace the glandular epithelial cells that are lost to stress from digestion and evacuation. 4.0/). This is made possible by the abundant intestinal stem cells at the bottom of the intestinal Pharmaceuticals 2023, 16, 1026. https://doi.org/10.3390/ph16071026 https://www.mdpi.com/journal/pharmaceuticals Pharmaceuticals 2023, 16, 1026 2 of 16 crypts, which have the capacity for continual proliferation and differentiation. As these pluripotent cells differentiate into epithelial cells, they migrate from the crypt to the villus and become fully differentiated epithelial cells such as enterocytes, goblet cells, Paneth cells, and enteroendocrine cells [5]. In the event of oncogenic insults, the epithelial cells lose their ability to properly regulate proliferation and transform into a benign adenoma that may turn cancerous (adenocarcinoma) and metastasize over time [2]. Among the suite of signaling cascades that drive CRC, the canonical Wingless Inte- grated Type-1 (WNT) pathway is principal. Indeed, over 90% of CRC cases occur due to driver mutations that result in constitutive activation of the WNT signaling pathway. The pathway is an evolutionarily conserved pathway that can either be transduced via canon- ical (WNT/β-catenin) or non-canonical cascades. It is activated when WNT proteins—a family of secreted cysteine-rich glycoproteins—activate their cell surface receptors, known as Frizzled (FZD) [6,7]. In the canonical WNT cascade, WNT ligands bind FZD, which in turn propagates a signal via Dishevelled to cause cytosolic accumulation of β-catenin. Accumulated β-catenin translocates into the nucleus where it forms heterodimers with T cell factor/lymphoid enhancer factor (TCF/LEF) to upregulate the transcription of genes such as Axin2, c-MYC, cyclin D1, WISP1, and OCT4. These genes promote the proliferation, survival, apoptosis, and stemness of the CRC cells [7,8]. Constitutive activation of WNT signaling confers a clonal advantage to CRC cells, which increases their fitness through modification of the tumor microenvironment [9]. Additionally, WNT/β-catenin signaling promotes stem cell-like properties that are associated with drug resistance and tumor recur- rence [5]. Considering the significance of WNT/β-catenin signaling in CRC development and progression, WNT-modulating compounds may serve as promising regimens for CRC. Due to their chemical diversity, some studies are focusing on naturally occurring compounds in plants and their structural analogs as sources of pharmaceutically use- ful small organic molecules for cancer treatment. One such compound is cryptolepine, the main alkaloid extracted from the roots of an African-indigenous shrub, Cryptolepis sanguinolenta [10,11]. Cryptolepine is pharmacologically active and a potential antiplas- modial, antibacterial, antiprotozoal, antifungal, anti-hyperglycemic, antithrombotic, anti- inflammatory, and anticancer agent [10,12]. The anticancer property of cryptolepine is particularly of interest because, unlike many anticancer agents, cryptolepine exhibits low mutagenic and genotoxic effects [13]. Moreover, a study showed that cryptolepine is highly selective in inhibiting the viability of skin cancer cells versus normal cells [14]. Another study reported no abnormalities in the hematological, liver, and kidney function indices within 6 months of cryptolepine exposure in a 49-year-old male [15], suggesting that it may be a safe alternative for cancer treatment. Although the molecular basis for its anticancer activity remains largely ambiguous, mechanistic studies have shown that cryptolepine acts through mechanisms such as topoi- somerase II and telomerase inhibition, as well as DNA intercalation [16–18]. Using hep- atocellular carcinoma cell models, Domfeh et al. (2021) demonstrated that cryptolepine mediates its anticancer activity by upregulating anticancer pathway genes and downreg- ulating pro-cancer pathway genes. In their study, it was found that cryptolepine inhibits the transcriptional activity of the TCF/LEF transcription factor [19]. Given the modulatory activity of cryptolepine on WNT/β-catenin signaling, it is imperative to assess its effect on CRC models. In this study, we demonstrate that cryptolepine suppresses CRC cell proliferation, stemness, and metastatic processes through inhibition of the WNT/β-catenin signaling pathway. 2. Results 2.1. Effects of Cryptolepine, XAV 939, and WNT3a on Cell Viability To determine the effects of cryptolepine, XAV 939, and WNT3a on cell viability, an MTT assay was performed. Cryptolepine and XAV 939 reduced cell viability in a dose- and time-dependent manner. The IC50 values shown in Table 1 indicate that cryptolepine is more cytotoxic than XAV 939. Furthermore, cryptolepine was more cytotoxic against Pharmaceuticals 2023, 16, 1026 3 of 16 DLD1 than COLO205 cells, whereas the potency of XAV 939 was identical in both cell lines (Figure 1A,B). WNT3a had no obvious effect on the viability of both cell lines (Figure 1C). Pharmaceuticals 2023, 16, x FOR PEERB RaEsVeIEdWo n a literature search [20–22], 100 ng/mL of WNT3a was used to ac3t iovf a1t8e WNT signaling in further experiments. Table 1. IC50 values for treatment conditions. 2. Results 2.1. Effects of Cryptolepine, XAV 939, and WNT3a on Cell ViabilIitCy5 0 (µM) of Compounds CelTl Lo idneetsermine the effects of Tcirmypet(ohle) pine, XAV 93C9r, yapntdo lWepNinTe3a on cell viabXiAliVty,9 a3n9 MTT assay was performed. Crypto2l4epine and XAV 9395 .0re1d±uc0e.4d3 cell viability 3in2 .1a5 d±os3e.-1 9 anCdO tLimOe2-0d5ependent manner. The IC4850 values shown in2 T.4a5bl±e 10 .i5n9dicate that cry2p4t.8o7le±pin2.e4 5 is more cytotoxic than XAV 939. Fu72rthermore, cryptole1p.4i3ne± w0.a1s5 more cytotox1i6c. 5a1ga±in0s.t2 3 DLD1 than COLO205 cells, whereas the potency of XAV 939 was identical in both cell lines (Figure 1A,B). WNT3a had no obvio2u4s effect on the viab3i.l5it1y± of0 b.3o1th cell lines (F3ig6.u5r1e± 1C1).0. 4 BaDsLedD 1on a literature search [20–22]47, 8 2100 ng/mL of WNT 13.16 ± 0.070.8a6 w±as0 .u0s2ed to activate 2 W5.5N9T± 3.2219.19 ± si2g.-70 naling in further experiments. Figurree 11. .EEfffefectcst sofo cfrcyrpytpolteopleinpei,n XeA, XVA 9V399, 3an9d, a WndNWT3Na oTn3 aceolln vciaebllilvitiya.b CilOitLyO. C20O5L aOnd2 0D5LaDn1d cDellLsD 1 cells weerree ttrreeaatteedd wwitiht hinicnrceraesainsgin cgonccoenncteranttiroantsi oonf s(Ao)f c(rAy)pctorlyepptinoele opri n(Be) oXrA(VB )9X39A fVor9 2349, 4fo8,r a2n4d, 4728 ,ha, nd 72 h, oorr ((CC)) WWNNTT3a3 afofro 2r42 h4. hC.elCl veilalbviliiatyb iwlitays dweatesrmdeinteerdm uisninegd auns iMngTTa nassMayT.T Daastas aayr.e pDraetsaenatreed pasr esented mean ± SEM of three independent experiments performed in triplicate. * p ≤ 0.05, ** p ≤ 0.01, *** p ≤ a0.s00m1,e *a*n**± p ≤S E0.M000o1f vths.r uenetirneadteepd.e nnsd: ennott esixgpneifiricmanetn. ts performed in triplicate. * p ≤ 0.05, ** p ≤ 0.01, *** p ≤ 0.001, **** p ≤ 0.0001 vs. untreated. ns: not significant. Pharmaceuticals 2023, 16, 1026 4 of 16 2.2. Cryptolepine Inhibits WNT/β-Catenin Signaling in CRC Cells To assess the effect of cryptolepine on WNT/β-catenin signaling, the cells were treated as described, and mRNA levels of β-catenin, c-MYC, and WISP1 were evalu- ated [7]. WNT3a induced the expression of β-catenin, c-MYC, and WISP1, while XAV 939 inhibited their expression. Cryptolepine did not affect the basal levels of all three genes in both cell lines but significantly suppressed WNT3a-induced expression of the genes Pharmaceuticals 2023, 16, x FOR PEER( R FEiVgIuErWe 2A–C). This suggests that cryptolepine inhibits WNT3a-mediated ac5t iovf a1t8i on of the WNT/β-catenin pathway. FFiigguurree 22. .CCryryptpotloepleinpein ienhinibhitisb WitsNWT/Nβ-Tca/tβen-icna tseignninalisnigg nina lCinRgCi nceCllsR. CCOceLlOls2.0C5 OanLdO D2L05D1a ncdellDs LD1 cells wweerree ttrreeaatetedd wwithit hcrycrpytoplteoplienpei nore XoArVX 9A3V9 f9o3r9 48fo hr i4n8 thhe ipnrethseenpcer eosre anbcseenocrea obf sWenNcTe3oaf. TWhNe mTR3aN. AT he mRNA levels of (A) β-catenin, (B) c-MYC, and (C) WISP1 were determined by RT-qPCR. Data are presented alesv melesano f±( ASE)Mβ -ocfa ttehnreine, i(nBd)epc-eMndYeCnt, aexnpder(iCm)eWntIsS pPe1rfworemreedd ient etrrmipliincaetde.b *y* pR ≤T -0q.0P1C, R**.* Dp a≤t a0.0a0r1e, presented *a*s**m p e≤a 0n.0±00S1E vMs. uonfttrhearetedi.n #d pe p≤ e0n.0d5e, n##t pe x≤p 0e.0ri1m, #e#n#t ps p≤ e0r.0fo01r,m #e##d# ipn ≤t r0i.p0l0i0c1a tves.. *W* Np T≤3a0.. 0C1R,Y**P*: p ≤ 0.001, *c*r*y*ppto≤lep0i.n0e0;0 X1AvVs:. XuAnVtr e9a3t9e; dm.R#NpA≤: m0.e0s5s,e#n#gepr ≤rib0o.n0u1,cl#e#ic# apci≤d; 0n.s0:0 n1o, t# s#i#g#nipfic≤an0t..0 001 vs. WNT3a. CRYP: cryptolepine; XAV: XAV 939; mRNA: messenger ribonucleic acid; ns: not significant. 2.3. Cryptolepine Downregulates Stem Cell Markers in CRC Aberrant WNT signals promote stemness in CRC, which is linked to poor disease outcomes [23]. To this end, the impact of cryptolepine on the expression of two stem cell markers—OCT4 and CD133—was examined [7]. WNT3a induced the expression of OCT4 and CD133 in both cell lines and XAV 939 decreased their expression in unstimulated and Pharmaceuticals 2023, 16, 1026 5 of 16 2.3. Cryptolepine Downregulates Stem Cell Markers in CRC Pharmaceuticals 2023, 16, x FOR PEER REVIEAWb errant WNT signals promote stemness in CRC, which is linked to poor d6i soefa s1e8 outcomes [23]. To this end, the impact of cryptolepine on the expression of two stem cell markers—OCT4 and CD133—was examined [7]. WNT3a induced the expression of OCT4 and CD133 in both cell lines and XAV 939 decreased their expression in unstimulated and WNNTT33aa--ssttiimuullaatteedd cceellllss ((FFiigguurree 33AA,,BB)).. CCrryyppttoolleeppiinnee ddiidd nnoott aaffffeecctt tthhee bbaassaall lleevveell ooff OOCCTT44 iinn bbootthh cceellllss bbuutt ssuupppprreesssseedd WNTT33aa--iinndduucceedd OCCTT44 eexxpprreessssiioonn ((FFiigguurree 33A)). .IInntteerreessttiinngglyly,, ccrryyppttoolleeppiinnee inindduucceeddC DCD131333ex epxrepsrseisosnioinn biont hbocethll scbeulltsr ebpurte srseepdreWssNedT3 aW-iNndTu3cae-dinCdDuc1e3d3 CexDp1r3e3s seioxnpr(eFsisgiounre (3FBig)u, rseu g3gBe),s tsinugggtehsattincgr ytphtaot lecpryinpetomleapyinpe rmomayo tperoormsoutpe porre sssuCppDr1e3s3s CexDp1r3e3ss eioxnprdeesspieond dinegpeonndWinNg oTna cWtiNviTty aicntitvhietyc einll .the cell. Figure 3.. Cryptollepiine downrregullatteess sttem cellll markerrss iin CRC.. COLO205 and DLD1 cells were ttrreeaatteedd wiitthh ccrryyppttoolleeppiinnee oorr XXAV 993399 ffoorr 4488 hh iinn tthhee pprreesseennccee oorr aabbsseennccee ooff WNTT33aa.. TThhee mRRNA lleevveellss ooff ((AA)) OOCCTT44 aanndd ((BB)) CCDD113333 wweerree ddeetteerrmmiinneedd bbyy RRTT--qqPPCCRR.. DDaattaa aarree pprreesseenntteedda assm meeaann± ± SSEEMM ooff tthhrreeee iinnddeeppeennddeenntt eexxppeerrimimeenntstsp peerfroformrmededi nint rtirpilpicliactaet.e*. **p* p≤ ≤0 0.0.011, ,* *****pp≤ ≤ 00..000011,, ********pp ≤≤ 00.0.0000011 vvss.. untreated. ## p ≤≤ 0.01, ### p ≤ 0≤.001, #### p ≤ 0.≤0001 vs. WNT3a. CRYP: cryptolepine; XAV: XAV 939; munRtNreAat:e md.e#ss#epnger0 r.0ib1o, n##u#clpeic a0c.i0d0;1 n,s#:# n#o#t psign0ifi.0c0a0n1t.v s. WNT3a. CRYP: cryptolepine; XAV: XAV 939; mRNA: messenger ribonucleic acid; ns: not significant. 22..44.. CCrryyppttoolleeppiinnee IInnhhiibbiittss CClloonnooggeenniicciittyy iinn CCRRCC GGiivveenn tthhee iinnhhiibbiittoorryy eeffffeecctt ooff ccrryyppttoolleeppiinnee oonn tthhee eexxpprreessssiioonn ooff sstteemnneessss maarrkkeerrss,, wee aasssseesssseedd iittss iinnflfluueennccee oonnt htheec ocololonnyy-f-oformrminingga baibliitlyityo foCf RCCRCce cllesl.lsT.h Tehaes saasysaays saesssseessstehse thcae- cpaapciatcyitoyf oafs ain sgilnegcleel lcteollg troo wgroinwto inatcoo lao cnoyloonf yat olef aastt l5e0ascte l5l0s, cwelhlsic, hwshigicnhifi seigs nstiefimesn setsesmbnaseesds boanstehde ornat tihone arlaetitohnaat lfeo ltlhoawt ifnogllotrweaintmg etrneta, tsmteemntc, esltlesmus cuealllsly upseuraslilsyt panerdsirsetg aende rraetgeetnoeirnaittei- taot eintuitmiaoter itguemneosriisg[e2n4e].siIsn [t2h4i]s. sItnu dthyi,sW stNudTy3a, WprNomT3oate pdrcoomloonteydf ocromloantiyo nfoirnmbaottihonc eilnl lbinoeths, ceolnl filirnmesin, cgotnhfierimnflinuge nthce ionfflWueNnTces iogfn WalNinTg osingnstaelmingn eosns isnteCmRnCescse ilnls .CSRuCrp creisllisn. gSluy,rpXrAisV- i9n3g9lyin, cXreAaVse d93t9h eincocrloenasyefdo rtmhea ticonloonfyu nfosrtimautiloante dofc eullnssatinmdurleaptereds sceedllsW aNnTd3 ar-eipnrdeussced WNT3a-induced clonogenicity in DLD1 cells but not COLO205 cells. On the other hand, cryptolepine suppressed clonogenicity in both unstimulated and WNT3a-stimulated COLO205 and DLD1 cells, suggesting that cryptolepine inhibits colony formation and hence stem cell-like properties of the CRC cells (Figure 4A,B). Pharmaceuticals 2023, 16, 1026 6 of 16 clonogenicity in DLD1 cells but not COLO205 cells. On the other hand, cryptolepine Pharmaceuticals 2023, 16, x FOR PEER REVIEW suppressed clonogenicity in both unstimulated and WNT3a-stimulated C7O LoOf 2108 5 and DLD1 cells, suggesting that cryptolepine inhibits colony formation and hence stem cell-like properties of the CRC cells (Figure 4A,B). Figure 4. CryptolepineF ignuhrieb4i.tsC crylopntoolegpeineicinithyib iints CclRonCo.g (eAni)c iCtyOinLCOR2C0.5(A a)nCdO (LBO) 2D05LaDn1d c(Be)llDs LwDe1rcee ltlrsewaeteredt reated with cryptolepine or XwAitVh c9r3yp9 tionle pthinee porreXsAeVnc9e3 9oirn athbesepnrecsee nocfe WorNabTse3nac,e aonfdW aN cTo3alo, annyd faocromloantyiofnor masastaioyn assay was performed. Colonwya asrpeearsfo armree dex. pCroelsosneyda raesa sa apreerecxepnretsasgeed oasf ua npterreceantteadg eceolflsu natnreda tpedrecseellnstaendd apsr ebsaern ted as charts. Data are presenbtaerdc haasr mts.eDanat ±a SarEeMpr eosfe tnhterdeea sinmdeeapne±ndSeEnMt eoxf ptherreieminednetps epnedrefnotremxpeedr iimne tnrtisppliecrafoterm. ed in *** p ≤ 0.001, **** p ≤ 0.0tr0i0p1li cvaste. .u*n**trpe≤at0e.d00. 1#,#* *p* *≤ p0.≤010,. 0#0#0#1#v ps .≤ u0n.0tr0e0at1e dv.s.# W# pN≤T30.a0.1 C, #R#Y##Pp: c≤ry0p.0t0o0l1epvsin. eW; NT3a. CRYP: cryptolepine; XAV: XAV 939. XAV: XAV 939. 2.5. Cryptolepine Represses Epithelial-to-Mesenchymal Transition (EMT) in CRC Metastasis is a multistep process that involves landmark events like EMT, where can- cer cells become highly motile. Because deregulated WNT/β-catenin signaling drives EMT in CRC [25], the expression of two EMT genes—SNAI1 (encodes SNAIL1 protein) and TWIST1—were examined. WNT3a induced the expression of SNAI1 and TWIST1 genes in both cell lines. XAV 939 induced the expression of SNAI1 in both cell lines, whereas cryptolepine did not affect SNAI1 levels in unstimulated cells. In contrast, both XAV 939 and cryptolepine significantly inhibited WNT3a-induced SNAI1 expression (Figure 5A). Furthermore, XAV 939 and cryptolepine did not affect the basal levels of TWIST1 mRNA in unstimulated cells but suppressed WNT3a-induced TWIST1 upregulation (Figure 5B). The results, therefore, show that cryptolepine represses EMT in CRC cells with hyperac- tive WNT signaling via downregulation of SNAI1 and TWIST1. Pharmaceuticals 2023, 16, 1026 7 of 16 2.5. Cryptolepine Represses Epithelial-to-Mesenchymal Transition (EMT) in CRC Metastasis is a multistep process that involves landmark events like EMT, where cancer cells become highly motile. Because deregulated WNT/β-catenin signaling drives EMT in CRC [25], the expression of two EMT genes—SNAI1 (encodes SNAIL1 protein) and TWIST1—were examined. WNT3a induced the expression of SNAI1 and TWIST1 genes in both cell lines. XAV 939 induced the expression of SNAI1 in both cell lines, whereas cryptolepine did not affect SNAI1 levels in unstimulated cells. In contrast, both XAV 939 and cryptolepine significantly inhibited WNT3a-induced SNAI1 expression (Figure 5A). Furthermore, XAV 939 and cryptolepine did not affect the basal levels of TWIST1 mRNA Pharmaceuticals 2023, 16, x FOR PEERi nREuVnIsEtiWm ulated cells but suppressed WNT3a-induced TWIST1 upregulation (Figure 5B). 8 of 18 The results, therefore, show that cryptolepine represses EMT in CRC cells with hyperactive WNT signaling via downregulation of SNAI1 and TWIST1. Fiigguurere5 .5C. rCyprtyopletpoilneeprienper ersesepsrepsistehse lieapl-itoth-meleisaeln-tcoh-ymeasletrnacnhsiytimona(lE tMraTn) sinitiCoRnC .(ECMOLTO) 2i0n5 aCnRdC. COLO205 DanLdD 1DcLelDls1w cereelltsr ewatedrew tirtehactreydp twoleitphin ceroyrpXtAoVlep93in9 efo or r4 8XhAiVn th9e39p rfeosre n4c8e ohr ianb stehnec eporfeWseNnTce3a o. r absence of TWheNmTR3Na.A Tlhevee lms oRfN(AA) SlNevAeIl1sa onfd ((AB)) TSWNISATI11 waenrde d(Bet)e rTmWinIeSdTb1y wRTe-rqeP CdRe.teDramtainareedp rbeyse nRtTed-qaPsCR. Data are mpreeasne±ntSeEdM aos fmtheraeeni n±d SeEpeMnd oefn tthexrpeeer iimndenetpsepnedrfeonrmt eedxpinetrriimpleicnattes. p**e*r*fpor≤m0e.0d0 0i1n vtsr.ipunlitcraeatete. d*.*** p ≤ 0.0001 #v#s.p u≤n0tr.0e1a,t#e#d#.# #p# ≤p 0≤. 000.0011,v #s.##W#N pT ≤3 a0..0C0R0Y1P v: csr. yWptNoleTp3ian.e ;CXRAYVP: :X cArVyp9t3o9l;empRinNeA; X: mAeVs:s eXnAgeVr 939; mRNA: rmibeosnsuecnlegicera criidb;onns:uncolet isci ganciifidc;a nnts.: not significant. 2.6. Cryptolepine Reduces CRC Cell Migration A wound healing assay was performed to evaluate the effect of cryptolepine on cell migration. DLD1 cells were treated with IC50 and IC30 of cryptolepine or IC50 of XAV 939 in the presence or absence of WNT3a. Cell migration was monitored at 0, 24, and 48 h. Activating or inhibiting WNT/β-catenin signaling promoted or inhibited cell migration, respectively. The IC30 and IC50 of cryptolepine remarkably inhibited wound closure in both unstimulated and WNT3a-stimulated DLD1 cells (Figure 6A,B). These findings demonstrate that cryptolepine is a potent inhibitor of DLD1 cell migration. Pharmaceuticals 2023, 16, 1026 8 of 16 2.6. Cryptolepine Reduces CRC Cell Migration A wound healing assay was performed to evaluate the effect of cryptolepine on cell migration. DLD1 cells were treated with IC50 and IC30 of cryptolepine or IC50 of XAV 939 in the presence or absence of WNT3a. Cell migration was monitored at 0, 24, and 48 h. Activating or inhibiting WNT/β-catenin signaling promoted or inhibited cell migration, Pharmaceuticals 2023, 16, x FOR PEER REVIEreWsp ectively. The IC30 and IC50 of cryptolepine remarkably inhibited wound closure 9 of 18 in both unstimulated and WNT3a-stimulated DLD1 cells (Figure 6A,B). These findings demonstrate that cryptolepine is a potent inhibitor of DLD1 cell migration. FigureF i6gu. rCer6y.pCtorylepptoilnepei nredreudcuecse sCCRRCC ccell miiggraratitoino.nD. DLDL1Dc1e llcsewllse rwe terreeat etrdewatiethd cwryipttho lcerpyinpetolepine or XAV 9o3r9X fAoVr 94389 hfo irn4 8thhei n(Ath) ep(rAe)spenrecsen ocre (oBr )( Ba)basbesnencece ooff WNT33aa. . TThheew wouonudnadre araetae acth etaicmhe time point is exppreosinsteids eaxsp are spseedrcaesnatapgeerc eonft athgee o0f hth.e O0rhi.gOinraigl inmalamgnaigfincifiactaiotinon ××101000. .DDaattaa aarreep prerseesnetnedteads as mean ± SEM omfe tahnr±eeS EinMdoefptehnredeeinndt eepxepndeernimt eexnptesr impeernftos rpmerefodr mined tirniptrliipclaicteat.e *. ** *pp ≤≤ 00..0011,, ********p ≤p ≤0. 000.001001 vs. un- treatedvs.. #u#n#tr pea ≤te 0d..0#0#1#,p #≤##0#.0 p0 1≤, #0#.#0#0p01≤ v0s.0. 0W01NvsT. 3WaN. CT3RaY. CPR: YcrPy: cprtyoplteopleipnien;e ;XXAAVV:: XXAAVV9 3993.9. 2.7. Cryptolepine Reduces CRC Cell Invasiveness 2.7. CryptTooleepxianme iRneedthueciems pCaRctCof Ccreylpl tIonlvepaisniveeonnecsesl l invasion, the levels of MMP2 and MMP9 Twoe reexdaetmerimnien etdh.eT himesepgaecnt eos fe nccroydpetporloetpeiinnaese sotnh actedlel girnadveasthioenh,i sttohleo gliecavleblasr roiefr MtoMP2 and MMPfacilitatea9n wuperreeg cdanecteerrcmell invasion [26]. Activating or inhibiting WNulation orindeodw.n Trehgeuslaet iogne,nreessp eenctcivoedlye, opfrMotMeiPn2as Te/sβ t-chaatetn dinesgigrnaalingand MMP9 in botdhece tllh leed tolin ehsi.stological barrieCrr ytop tfoalecpiliinteathea dcannocoebrv cioeulls ienffveactssioonn M[2M6]P. 2AacntdivMatMinPg9 oerx pirnehssiibointiinngu WnstNimTu/lβat-ecdatenin sig- naling led to an upregulation or downregulation, respectively, of MMP2 and MMP9 in both cell lines. Cryptolepine had no obvious effects on MMP2 and MMP9 expression in unstimulated cells but significantly reduced WNT3a-induced expression of these genes, confirming the selectivity of cryptolepine for cancer cells with hyperactive WNT signaling (Figure 7A,B). Pharmaceuticals 2023, 16, 1026 9 of 16 Pharmaceuticals 2023, 16, x FOR PEER REVIEW 10 of 18 cells but significantly reduced WNT3a-induced expression of these genes, confirming the selectivity of cryptolepine for cancer cells with hyperactive WNT signaling (Figure 7A,B). FFiigurre 7.. Crrypttooleleppinienere rdeudcuesceCsR CCRcCel lceinllv iansivvaesnievsesn. eCsOs.L COO20L5Oa2n0d5D aLnDd1 DcLelDls1w ceerlelst rweaetreed treated with cwryitphtcorlyepptionleep oinre XorAXVA 9V3993 9fofor r4488 hh iinn tthheep prerseesnecnecoer aobrs eanbcseenofceW oNfT W3aN. TTh3eam. TRNheA mleRveNlsAo flevels of (A) M(AM) MP2M aPn2da n(dB)( BM) MMP9P 9wweerree ddeetteerrmiinneeddb byyR TR-TqP-qCPRC. RD.a tDa aatrae parrees epnrteesdenastemde aans m± eSaEnM ±o Sf EM of three itnhdreeepiennddepeennt deexnpteerxipmereinmtesn ptserpfeorrfmormede dinin trtirpipliliccaattee.. ** pp ≤≤ 00..0055,, **** pp ≤≤ 00..0011,, ******** pp≤ ≤ 00..00000011v vs.s. untreated. #u#n tpr e≤a t0ed.0.1#,# #p#≤# 0p. 0≤1 ,0#.#0#0p1,≤ ##0.#0#0 1p, #≤# #0#.0p0≤010 .v00s0. 1WvsN. WT3NaT. 3Ca.RCYRPY:P c: rcyryppttoolleeppiinnee; ;X XAAV:VX:A XVA9V39 ;939; mRNA: mmeRsNseAn:gmeers sreibnogenrurcibleoincu accleiidc;a ncisd: ;nnos:t nsoigt nsiigfincifiancatn. t. 3. Discussion 3. DiTshcue simsipoonr tance of WNT/β-catenin signaling in CRC has been established [9], and reseaTrchei sismtipllorntgaoninceg toof dWevNeloTp//βd-cisactoevneirns msiaglnl maloinlegc uilne iCnhRiCbi tohrasso fbteheenp aetshtwabalyisthoed [9], and rteresaetaCrcRhC i.sC srtyipllt oolnepgionienigs atop ldanevt-edleorpiv/eddisccoomvpeoru snmdathlla mt hoalsebceuelne fionuhnidbittoorinsh oibf itththee pathway to ttrreaants cCriRptCio. nCarl yapcttiovilteypoinf eT CisF /aL pElFanptr-odteeirniv(aedtr acnosmcrpipotiuonndal tfhacatto rhians WbeNeTn/ fβo-ucantden tino inhibit the signaling) in hepatocellular carcinoma cells [19]. This study, therefore, investigated the tproatnesnctirailpotfiocnryapl taocletpiviniteya os fa TmCoFd/uLlaEtFor porfoWteNinT /(aβ -tcraatnenscinrispigtinoanlianlg fiancCtoRrC inc eWllsN. T/β-catenin sig- nalinIgn) tihnis hsetupdayt,occreyllputolalerp cinaerceinxhoimbitae dcemllso r[e19p]o.t eTnhtiscy sttoutodxyic, tehffeercetsfotrhea,n inXvAeVst9ig39a.ted the po- tCenrytpiatol loefp icnreyptatrogletps iDneN aAs, ato mpooisdoumlaertoasre oIfI ,WanNdTt/eβlo-mcaetreansien, asnigdnaaflfienctgs ian mCyRrCia dceolfls. signaIlnin gthpiast hswtuadyys ,[ 1c6r–y1p9t]o. lXeApVine9 3e9x, honibtihteedo tmheorrhea npdo,teisnat tcayntkoytroaxsiec inehffiebcittosr tthhaatn XAV 939. Cspreycpifitocalellpyiinneh itbaitrsgWetNs TDsNigAna, ltiongpo[2i7s]o.mTheerasusep eIrIi,o arncydt otetoloximc eefrfeacsteo, facnrydp atoffleepcitnse am mayyriad of sig- nthaelrinefgo rpeabtehawttraiybus t[e1d6t–o1i9ts].a bXiAlitVy t9o3r9e,g uolna ttehme uolttihpeler shigannadli,n igs paa tthawnkayysrsaismeu ilntahnieboiutoslry .that specif- ically inhibits WNT signaling [27]. The superior cytotoxic effect of cryptolepine may there- fore be attributed to its ability to regulate multiple signaling pathways simultaneously. Surprisingly, stimulating WNT activity in the CRC cells with recombinant WNT3a had no obvious effect on viability. In their study, Reischmann et al., (2015) found that, although WNT3a enhances HEK293 cell proliferation, this effect can only be detected by measuring DNA synthesis (BrdU assay) rather than mitochondrial activity (MTT assay) [28]. While this study did not assess the proliferative effects of WNT3a using other assays, the appar- ent ineffectiveness of WNT3a may be ascribed to limitations in the method of measuring cell viability i.e., MTT assay. Pharmaceuticals 2023, 16, 1026 10 of 16 Surprisingly, stimulating WNT activity in the CRC cells with recombinant WNT3a had no obvious effect on viability. In their study, Reischmann et al., (2015) found that, although WNT3a enhances HEK293 cell proliferation, this effect can only be detected by measuring DNA synthesis (BrdU assay) rather than mitochondrial activity (MTT assay) [28]. While this study did not assess the proliferative effects of WNT3a using other assays, the apparent ineffectiveness of WNT3a may be ascribed to limitations in the method of measuring cell viability i.e., MTT assay. β-catenin is the main effector in canonical WNT signaling. It interacts with TCF/LEF and other proteins to induce the transcription of WNT-target genes [29]. The effect of tankyrase inhibition on the expression of β-catenin shows that XAV 939 does not only facilitate the degradation of β-catenin protein but also reduces its mRNA level as previously reported [30]—either by inhibiting transcription of the CTNNB1 gene (encodes for β- catenin) or by facilitating the degradation of β-catenin mRNA. Although cryptolepine is reported to suppress the transcriptional activity of TCF/LEF [19], it is not known if cryptolepine indeed affects the WNT/β-catenin signaling pathway, or how it affects the pathway. This study revealed that cryptolepine inhibits WNT3a-induced expression of β-catenin, c-MYC, and WISP1. This may explain the findings by Domfeh et al. (2021) who showed that cryptolepine suppresses the transcriptional activity of both TCF/LEF and MYC proteins [19]. Additionally, our findings are consistent with previous reports in which cryptolepine reduced c-MYC levels in melanoma cells [31]. In CRC, deregulated c-MYC is indispensable in cell growth and proliferation and is linked to unfavorable prognosis and poor patient survival [32]. WISP1 also enhances survival by protecting cancer cells from p53-mediated apoptosis [33]. The inhibitory effect of cryptolepine on the expression of these genes is therefore favorable for CRC treatment. Moreover, cryptolepine suppressed WNT/β-catenin signaling in WNT3a-stimulated cells only. We, therefore, hypothesize that the influence of cryptolepine on the WNT/β-catenin pathway is selective for cells with hyperactive WNT signals. Colorectal cancer stem cells (CSCs) express cell surface markers such as OCT4 and CD133 (AC133 or prominin 1). OCT4 promotes stem cell maintenance and immune evasion and positively correlates with liver metastasis in CRC [34,35]. CRC cells expressing CD133 are more resistant to radiochemotherapy and are an indication of worse overall survival and metastatic relapse [36,37]. WNT3a and XAV 939 had opposing effects on the expression of OCT4 and CD133, supporting evidence on the influence of WNT signaling on the expression of these genes and hence stemness of CRC cells. Cryptolepine reduced the mRNA levels of OCT4 in WNT3a-stimulated cells, signifying its effect on WNT-meditated OCT4 expression. Treatment of the cells with cryptolepine upregulated basal CD133 mRNA levels. We propose two theories to explain this observation. First, cryptolepine enhances the transcriptional activity of SMAD2/SMAD3/SMAD4 proteins [19], which drive transforming growth factor β (TGFβ) signaling. TGFβ has been shown to enhance CD133 expression through the demethylation of CD133 promoter-1 [38]. Thus, cryptolepine increased the expression of CD133 through the activation of TGFβ signaling. Second, cryptolepine promoted MAPK/ERK signaling by enhancing the transcriptional activity of the serum response element (SRE) protein [19]. Hyper-activated MAPK pathway leads to overexpression of CD133 mRNA and protein in CRC [39]. Therefore, cryptolepine increased CD133 expression by upregulating MAPK signaling. Experimental evidence is required to validate these theories, especially because cryptolepine also enhances the transcriptional activity of the p53 protein [19], which has been shown to suppress the activity of the CD133 promoter and downregulate CD133 expression [40]. This study also found that cryptolepine reduced WNT3a-induced CD133 expression, suggesting that it may promote or suppress CD133 expression depending on WNT activity in the cell. The current study found that WNT3a induced colony formation in both cell lines. Contrary to previous findings [41,42], tankyrase inhibition increased the colony formation of the cells. This may be attributed to an inability of XAV 939 to exert a long-term effect on the CRC cells, allowing them to regenerate after treatment. Conversely, cryptolepine Pharmaceuticals 2023, 16, 1026 11 of 16 significantly suppressed the colony-forming ability of unstimulated and WNT3a-stimulated cells. The superior ability of cryptolepine over XAV 939 to inhibit colony formation may be attributed to the capacity of cryptolepine to exert a long-lasting effect on the cells. Moreover, the ability of cryptolepine to inhibit telomerase activity and cause DNA damage may have accounted for this observation, as these events also suppress colony-forming ability [43,44]. One essential step in metastasis is EMT, a phenomenon where cells undergo rearrange- ment of the cytoskeleton and switch from a non-motile epithelial state to a motile mesenchy- mal state. EMT facilitates cell migration and generates and maintains CSCs [45]. Several transcription factors, including SNAIL1 and TWIST1, regulate EMT [25]. In this study, WNT3a induced SNAI1 expression, corroborating previous reports [46,47]. Tankyrase inhibition with XAV 939 upregulated basal SNAI1 expression in both cell lines. Contrasting findings have been reported in this regard. While some research found that XAV 939 decreased SNAIL1 expression [48,49], other studies found that XAV 939 increased SNAIL1 expression [50,51]. Indeed, XAV 939 stabilizes and increases the abundance of Axin proteins, which in turn activate SNAIL1 expression [47]. This may explain the increase in SNAI1 ex- pression following tankyrase inhibition. Cryptolepine significantly reduced SNAI1 mRNA levels in WNT3a-stimulated but not unstimulated cells, demonstrating the ability of cryp- tolepine to inhibit EMT through WNT signaling. We also found that WNT3a induced TWIST1 expression, which is consistent with previous studies that identified TWIST1 as a WNT-inducible transcription factor whose expression can be activated by WNT3a [52,53]. Cryptolepine did not affect basal levels of TWIST1 but reduced WNT3a-induced TWIST1 levels. In cancer, the expression of TWIST1 is associated with lymphatic vessel invasion, lymph node metastasis, and perineural invasion [25]. Additionally, TIWST1 binds to β-catenin and enhances the transcriptional activity of the β-catenin/TCF4 complex [54]. Therefore, the ability of cryptolepine to suppress WNT3a-induced TWIST1 expression is a favorable outcome. Cancer cell migration is critical for distant metastasis [45]. The WNT/β-catenin path- way is essential for this phenomenon, hence the impact of cryptolepine on CRC cell migra- tion was studied. Stimulating WNT signaling promoted cell migration, whereas inhibiting WNT signaling suppressed migration. This is supported by reports that WNT signaling supports cell migration, and inhibition of tankyrase activity attenuates WNT3a-induced cell migration [30,55]. Furthermore, cryptolepine remarkably impeded cell migration, both under unstimulated and WNT3a-stimulated conditions. These findings, therefore, indicate that cryptolepine suppresses the migration of CRC cells. A key event in cancer invasion is the breakdown and remodeling of the extracellular matrix by matrix metalloproteinases (MMPs). In CRC, MMP2 and MMP9 degrade the his- tological barrier that would normally prevent invasion. Their overexpression is associated with the transition from colon adenoma to adenocarcinoma and is correlated with poor prognosis in CRC [26,56]. In this study, WNT3a induced MMP2 and MMP9 expression. Conversely, tankyrase inhibition suppressed the expression of these genes. This corrobo- rates findings that WNT3a upregulates downstream WNT targets MMP2 and MMP9 [53,57], while XAV 939 suppresses their expression [48,49]. Additionally in this study, cryptolepine had no effect on MMP2 and MMP9 basal mRNA levels but suppressed WNT3a-induced expression of these genes, supporting the theory that the effect of cryptolepine on the WNT/β-catenin pathway is selective for cells with hyperactive WNT signaling. In conclusion, cryptolepine reduces WNT3a-induced expression of WNT target genes and suppresses the proliferation, stemness, and metastatic processes of CRC cells (Figure 8). Our findings suggest that the effect of cryptolepine on the WNT/β-catenin pathway is specific for CRC cells with hyper-activated WNT signals. Thus, cryptolepine may be best used against WNT-driven (WNT-mutant) cancers. Moreover, while both cell lines used in this study have a mutant APC gene, COLO205 has additional β-catenin and BRAF mutations, whereas DLD1 has an additional KRAS mutation [58]. It is uncertain how the additional mutations will affect the activity of cryptolepine. However, the ability of cryptolepine to inhibit the anticancer properties of both cell lines is a favorable outcome as it indicates that Pharmaceuticals 2023, 16, 1026 12 of 16 in spite of the additional mutations that may cause CRC, cryptolepine may be an effective Pharmaceuticals 2023, 16, x FOR PEERt hReErVaIpEeWu tic option. Further in vivo studies are required to confirm our findings. Novel 13 of 18 evidence may, in the future, confirm the administration of cryptolepine to be an effective treatment for colorectal cancer patients. Figuurree8 .8P. rPorpoopseodsemde cmheanchisamntihsmrou tghhrowuhgichh wcrhypicthol ecpryinpetionlheipbitnseC iRnChipbriotgs rCesRsiCon pvrioagWreNsTsi/oβn- via WNT/β- catteenninins isginganlianlgin. Wg. NWTN3aTin3tae riancttesrwacitths iwtsictohg intast ceorgecneapteo rrteocetrpigtgoerr tao sterriigegs eorf ian tsrearcieellsu olafr ienvternatcsellular events tthaattc cuulmlminianteatine tihne tuhper eugpurlaetgiounlaotfiWonN oTft WargNetTg etanregs.eCt rgyepntoelse.p Cinreydpotwolnerpeginulea tdesowthenWreNguTltaatregse tthe WNT tar- geent egseineCsR iCn cCelRlsC, r ecseulllsti,n rgeisnutlhtienign hinib itthioen ionfhpirboiltiifoerna toiof np,rsotelmifenreastsi,oan,d smteemtansteasssis,. and metastasis. 4. Materials and Methods 44..1 M. CaeltleLriinaelssa annd dC uMltuertehods 4.1. CThelel CLOinLeOs a2n05d aCnudltDuLrDe 1 cell lines used in this study were originally obtained from the AmTherei cCanOTLyOpe2C05u latunrde CDoLllDec1ti ocnelaln ldinweesr eusaekdin idng tihftifsr osmtuPdryo fwesesroer Roergiginina aAlplyp ioahb-tained from Opong of the Department of Clinical Pathology at the Noguchi Memorial Institute for Med- itchael RAemseearrcihca, Gnh Taynpa.eT Cheuclteullrsew Ceroellmecaitniotanin aenddin wReorsew ae lkl iPnadrk gMifetm froormial PInrsotfiteustseo(Rr PRMegI)ina Appiah- 1O6p40onsugp polfe mtheen tDedepwairthtm10e%ntf eotfa lCbloivniinceals ePrautmho(FloBgSy) aantd t1h%e pNenoigcuillcihn-is tMreepmtoomryiaciln I-nstitute for gMluetdamicianle R(aelslepaurrcch,a sGehdafrnoam. TGhibec coe-llilfse twecehrneo mlogaiienst,aCinareldsb iand ,RCoAs,wUeSlAl P),aartk3 7M◦Ceminoarial Institute h(RuPmMidIifi) e1d64at0m sousphpeleremcoenttaeidni nwgit5h% 1C0O%2 .fetal bovine serum (FBS) and 1% penicillin-strepto- mycin-glutamine (all purchased from Gibco-life technologies, Carlsbad, CA, USA), at 37 4.2. Compounds/Drugs °C in a humidified atmosphere containing 5% CO2. Cryptolepine (C7124-10MG), XAV 939 (X3004-5MG), and human WNT3a (H17001- 10UG) were purchased from Sigma-Aldrich, St. Louis, MO, USA. XAV 939 is a specific i4n.2h.i bCitoomr opfouWnNdsT/Dsigrunaglsi ng, while human WNT3a is an activator of WNT signaling. The compoCurnydpstwoleerpe ipnrep (aCre7d1a2s4i-n1s0trMucGte)d, bXyAthVe m93a9n u(fXac3t0u0re4r-5i.Me.,Gcr)y,p atonledp ihnuemanadnX WAVN93T93a (H17001- w10eUreGd)is swoelvreed pinudrcimhaestheydl sfurolfmox iSdiegamnda-WANldTr3icAhw, aSst.r eLcoounsisti,t uMteOd ,w UithSA1×. XphAoVsp 9h3a9te -is a specific binuhffiebreitdosra olifn eW(PNBTS) .signaling, while human WNT3a is an activator of WNT signaling. The 4c.o3m. CpeloluVniadbisli twy eArses apyrepared as instructed by the manufacturer i.e., cryptolepine and XAV 939 Twheereef fdeicstssoolfvcerdyp itnol edpiimnee,tXhAyVl s9u3l9f,oaxniddeW aNnTd3 aWonNCTO3ALO w20a5s arnedcoDnLsDti1tuvtieabdi lwityith 1× phos- wpheraeted-ebteurffmeinred usasilningea n(PMBTST). assay. Briefly, the cells were seeded into 96-well plates at a density of 1 × 104 cells/well and incubated at 37 ◦C for 24 h. They were treated with c4r.y3p. tColeelpl iVnieaobrilXitAyV A9s3s9ayfo r 24, 48, and 72 h. For WNT3a, treatment was conducted for 24 h. Then 20 µL of 2.5 mg/mL 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT)T(hSieg meffa-eAcltds roicfh c, Sryt Lpotouilse,pMinOe,,U XSAAV), w9a3s9a, dadnedd Wto eNacTh3wa eollna CndOinLcOub2a0t5e daantd3 7D◦LCD1 viability fworer4eh d. Aetfeterrmwianrded, 1 u00siµnLgo afna cMidiTfiTed aisssoapyro. pBarnieofll wy,a tshaed dceedllst oweearceh wseeeldl aendd iinntcou b9a6t-ewd ell plates at at d37en◦Csitfoyr o30f m1 i×n .1A0b4 scoerlblasn/wceewll aasnreda dinactu5b70atnemd watit h37a V°Car ifooskr a2n4™ hL. UTXhemyu lwtimeroed etreated with cryptolepine or XAV 939 for 24, 48, and 72 h. For WNT3a, treatment was conducted for 24 h. Then 20 μL of 2.5 mg/mL 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) (Sigma-Aldrich, St Louis, MO, USA), was added to each well and incubated at 37 °C for 4 h. Afterward, 100 μL of acidified isopropanol was added to each well and incu- bated at 37 °C for 30 min. Absorbance was read at 570 nm with a Varioskan™ LUX multi- mode microplate reader (Thermo Fisher Scientific, Carlsbad, CA, USA). From the absorb- ance values, percent cell viabilities were calculated. 4.4. Colony Formation/Clonogenic Assay To assess the ability of the compounds to impact colony formation, the cells were seeded into 6-well plates at a density of 2 × 103 cells/well and incubated at 37 °C for 24 h. The cells in the WNT3a, WNT3a-cryptolepine, and WNT3a-XAV 939 groups were treated Pharmaceuticals 2023, 16, 1026 13 of 16 microplate reader (Thermo Fisher Scientific, Carlsbad, CA, USA). From the absorbance values, percent cell viabilities were calculated. 4.4. Colony Formation/Clonogenic Assay To assess the ability of the compounds to impact colony formation, the cells were seeded into 6-well plates at a density of 2 × 103 cells/well and incubated at 37 ◦C for 24 h. The cells in the WNT3a, WNT3a-cryptolepine, and WNT3a-XAV 939 groups were treated with 100 ng/mL of WNT3a for 24 h. Following this, the cells were treated or untreated with cryptolepine or XAV 939 for 72 h. At 3 days post-treatment, the culture medium was removed and fresh medium without drugs was added. The medium was changed every 3 days for 14 days. Then, the cells were washed with 1× PBS, fixed with 4% paraformaldehyde for 10 min, and stained with crystal violet dye (0.1% w/v) for 15 min. Excess dye was washed with 1× PBS and images were taken with an OPTIKA® microscope (OPTIKA, Ponteranica, Italy). ColonyArea plugin in ImageJ (NIH, Bethesda, MD, USA) was used to determine clonogenic cell growth [59]. 4.5. Wound Healing Assay A wound healing assay was performed to determine the effect of the compounds on cell migration. Briefly, 70 µL of cell suspension containing 2 × 104 cells were seeded into each chamber of a 35 mm µ-dish with culture-insert (Ibidi GmbH, Munich, Germany) placed in a 6-well plate, and incubated at 37 ◦C for 24 h. The cells in the WNT3a, WNT3a- cryptolepine, and WNT3a-XAV 939 groups were treated with 100 ng/mL of WNT3a for 24 h. Then, the inserts were removed and the cells were treated or untreated with cryptolepine or XAV 939 for 48 h. Cell migration was monitored with an OPTIKA® microscope (OPTIKA, Ponteranica, Italy) at 0, 24, and 48 h. The images were analyzed with the Wound Healing Size Tool plugin in ImageJ (NIH, Bethesda, MD, USA) to determine the percentage closure of the wound [60]. 4.6. Reverse-Transcription Quantitative PCR (RT-qPCR) COLO205 and DLD1 cells were seeded into 6-well plates at a density of 1 × 106 cells/well and treated as described. Total RNA was extracted using a Quick-RNA™ MiniPrep Plus Kit (Cat. No. R1057: Zymo Research, Irvine, CA, USA) per the manu- facturer’s protocol. Using a Luna Universal One-Step RT-qPCR kit (New England Biolabs, Ipswich, MA, USA), RT-qPCR was performed to determine the mRNA expression of β- catenin, c-MYC, WISP1, CD133, OCT4, SNAIL1, TWIST1, MMP2, and MMP9 genes. A QuantStudio™ 5 RT-PCR System (Thermo Fisher Scientific, Carlsbad, CA, USA) was used for reverse transcription and amplification. Thermocycling conditions were reverse tran- scription (55 ◦C for 15 min), initial denaturation (95 ◦C for 1 min), 40 cycles of denaturation (95 ◦C for 15 s), annealing (different temperatures depending on target gene for 15 s), and extension (60 ◦C for 1 min). The housekeeping gene GAPDH was used as an internal control. Sequences and annealing temperatures of primers are listed in Supplementary Table S1. QuantStudio™ Design & Analysis Software (Life Technologies, Carlsbad, CA, USA) was used to obtain CT values, and the 2−∆∆CT method [61] was used to determine the relative expression of each gene. 4.7. Statistical Analyses Data were analyzed using GraphPad Prism 9.1.2 (GraphPad Software, San Diego, CA, USA). One-way analysis of variance (ANOVA) followed by Dunnett’s post hoc test was used to compare differences between multiple groups. Data are presented as the mean ± standard error of the mean (SEM) of at least three independent experi- ments performed in triplicate. Group differences were considered statistically significant when p ≤ 0.05. Pharmaceuticals 2023, 16, 1026 14 of 16 Supplementary Materials: The following supporting information can be downloaded at: https://www.mdpi.com/article/10.3390/ph16071026/s1, Table S1: Sequences and annealing tem- peratures of primers. Author Contributions: Conceptualization, J.T.Q. and A.R.A.; methodology, J.T.Q., K.F., N.A.O. and A.K.S.; writing—original draft preparation, J.T.Q.; writing—review and editing, O.Q. and A.R.A.; supervision, O.Q. and A.R.A. All authors have read and agreed to the published version of the manuscript. Funding: This work was supported by funds from a World Bank African Centres of Excellence grant (WACCBIP+NCDs: Awandare) and a DELTAS Africa grant (DEL-15-007: Awandare). This research was funded in whole, or in part, by the Wellcome Trust [DEL-15-007] and the UK Foreign, Commonwealth & Development Office, with support from the Developing Excellence in Leadership, Training and Science in Africa (DELTAS Africa) programme. Institutional Review Board Statement: Not applicable. Informed Consent Statement: Not applicable. Data Availability Statement: The data presented in this study are available in the article and supple- mentary material. Acknowledgments: The authors would like to thank Alberta Serwaa, Nelson Edu, and Evans Armaah-Vedjesu of the Department of Biochemistry Cell and Molecular Biology at the University of Ghana for their technical support in running the RT-qPCR experiments. Conflicts of Interest: The authors declare no conflict of interest. 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